We have fixed a problem with the amino acid alignment of some V sequences in the macaque IGL set. This impacts the gapping of the V sequences (but not the nt sequence itself) and consequently changes the delineation of CDR1 and CDR2 in those sequences (the delineation of the start of CDR3 was not affected). Thanks to Chaim Schramm for pointing out the need for this change. If you want to examine the amino acid alignments, you can download them from the Sequences page by clicking the ‘AA Alignment’ button at the foot of the sequence table.
All macaque sets have also been updated to fix a problem found with some evidence sequences. For each sequence in the set, OGRDB stores one or more ‘evidence’ sequences which represent the source genomic or airr-seq data supporting the inclusion of the sequence in the reference set. We found that, in some cases, the starting location of the reference sequence within the evidence sequence was wrongly recorded. The fix for this problem does not change any of the sequences in the set, or their delineation, and so it is unlikely to impact analysis based on the sets.